When reading the Word and you are drawn to a verse or verses – circle them.  Go back and read previous chapters. Research them to get the full context.  Most importantly, spend much time in prayer and allow the Spirit to teach you.  

After Jesus rose from the dead, He visited Thomas because Thomas struggled with doubt.  Thomas knew Jesus and shouldn't have needed proof, but Thomas had issues.  Jesus met Thomas where he was because He loved him. We also have issues. Jesus meets us where we are because He loves us. Our brain can quickly understand John 20:26-28. It takes much time in prayer for them to reach our heart.